Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs146863150 chr6:26408472 C/CATAT 1.24E-8 284 25.57 29.77 9.77 KM Plot
KIRP rs147071797 chr10:43100141 A/T 7.16E-5 288 25.4 27.47 11.43 KM Plot
KIRP rs147323753 chr17:80735616 A/G 1.43E-10 281 26.37 25.6 16.77 KM Plot
KIRP rs147352546 chr13:47036725 G/A 1.9E-5 285 25.23 30.2 25.1 KM Plot
KIRP rs147397695 chr16:8714136 T/TAAA 4.25E-5 283 5.72 34.3 25.55 KM Plot
KIRP rs147899617 chr16:90080352 C/A 1.27E-7 286 24.13 34.67 10.7 KM Plot
KIRP rs148082388 chr6:28713118 G/GAC 3.02E-8 280 25.6 24.98 9.77 KM Plot
KIRP rs148101594 chr21:44254876 CGTGT/C 0.000171 286 25.53 43.53 13.07 KM Plot
KIRP rs148264300 chr17:80781925 CTTATT/C 2.64E-9 282 26.07 25.7 16.4 KM Plot
KIRP rs148568115 chr4:5541083 TC/T 2.11E-5 280 25.67 28.03 12.93 KM Plot
KIRP rs148873569 chr17:80728406 C/T 6.44E-9 283 26.07 28.35 16.4 KM Plot
KIRP rs149216683 chr10:43174241 CA/C 6.87E-5 289 25.57 27.47 11.43 KM Plot
KIRP rs149583087 chr6:27912437 G/A 2.21E-8 287 25.62 27.78 9.77 KM Plot
KIRP rs149626447 chr13:46982000 T/A 4.91E-7 289 24.8 37.87 23.23 KM Plot
KIRP rs149665610 chr6:27668465 TTTTG/T 1.21E-8 288 25.58 29.2 9.77 KM Plot